Cluster: HRGMv2_3615_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3615
- CGC Family ID: CGCFAM_01458
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3615_1 | HRGMv2_3615_1_40 | 40898 | 42328 | + | GT5 |
| CAZyme | HRGMv2_3615_1 | HRGMv2_3615_1_41 | 42330 | 44576 | + | GT35 |
| CAZyme | HRGMv2_3615_1 | HRGMv2_3615_1_42 | 44566 | 46446 | + | GH13_14 |
| pfam | HRGMv2_3615_1 | HRGMv2_3615_1_43 | 46456 | 48150 | + | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| STP | HRGMv2_3615_1 | HRGMv2_3615_1_44 | 48257 | 48760 | + | FHA |
| TC | HRGMv2_3615_1 | HRGMv2_3615_1_45 | 48753 | 50012 | + | 2.A.103.1.7 |
Gene ID: HRGMv2_3615_1_40
Type: CAZyme
Location: 40898 - 42328 (+)
Type: CAZyme
Location: 40898 - 42328 (+)
Gene ID: HRGMv2_3615_1_41
Type: CAZyme
Location: 42330 - 44576 (+)
Type: CAZyme
Location: 42330 - 44576 (+)
Gene ID: HRGMv2_3615_1_42
Type: CAZyme
Location: 44566 - 46446 (+)
Type: CAZyme
Location: 44566 - 46446 (+)
Gene ID: HRGMv2_3615_1_43
Type: pfam
Location: 46456 - 48150 (+)
Type: pfam
Location: 46456 - 48150 (+)
Gene ID: HRGMv2_3615_1_44
Type: STP
Location: 48257 - 48760 (+)
Type: STP
Location: 48257 - 48760 (+)
Gene ID: HRGMv2_3615_1_45
Type: TC
Location: 48753 - 50012 (+)
Type: TC
Location: 48753 - 50012 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus octavius
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.