Cluster: HRGMv2_3611_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3611
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3611_3 | HRGMv2_3611_3_96 | 90332 | 91594 | - | 2.A.103.1.3 |
| STP | HRGMv2_3611_3 | HRGMv2_3611_3_97 | 91587 | 92090 | - | FHA |
| pfam | HRGMv2_3611_3 | HRGMv2_3611_3_98 | 92191 | 93885 | - | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| CAZyme | HRGMv2_3611_3 | HRGMv2_3611_3_99 | 93875 | 95770 | - | GH13_14 |
| CAZyme | HRGMv2_3611_3 | HRGMv2_3611_3_100 | 95757 | 98012 | - | GT35 |
| CAZyme | HRGMv2_3611_3 | HRGMv2_3611_3_101 | 98018 | 99448 | - | GT5 |
Gene ID: HRGMv2_3611_3_96
Type: TC
Location: 90332 - 91594 (-)
Type: TC
Location: 90332 - 91594 (-)
Gene ID: HRGMv2_3611_3_97
Type: STP
Location: 91587 - 92090 (-)
Type: STP
Location: 91587 - 92090 (-)
Gene ID: HRGMv2_3611_3_98
Type: pfam
Location: 92191 - 93885 (-)
Type: pfam
Location: 92191 - 93885 (-)
Gene ID: HRGMv2_3611_3_99
Type: CAZyme
Location: 93875 - 95770 (-)
Type: CAZyme
Location: 93875 - 95770 (-)
Gene ID: HRGMv2_3611_3_100
Type: CAZyme
Location: 95757 - 98012 (-)
Type: CAZyme
Location: 95757 - 98012 (-)
Gene ID: HRGMv2_3611_3_101
Type: CAZyme
Location: 98018 - 99448 (-)
Type: CAZyme
Location: 98018 - 99448 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus degeneri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.