Cluster: HRGMv2_3611_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3611
- CGC Family ID: CGCFAM_02267
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3611_1 | HRGMv2_3611_1_116 | 127673 | 129466 | - | GH30_10 |
| CAZyme | HRGMv2_3611_1 | HRGMv2_3611_1_117 | 129472 | 130875 | - | GH1 |
| TC | HRGMv2_3611_1 | HRGMv2_3611_1_118 | 130875 | 132587 | - | 4.A.3.1.1 |
| TC | HRGMv2_3611_1 | HRGMv2_3611_1_119 | 132601 | 132927 | - | 4.A.3.1.3 |
Gene ID: HRGMv2_3611_1_116
Type: CAZyme
Location: 127673 - 129466 (-)
Type: CAZyme
Location: 127673 - 129466 (-)
Gene ID: HRGMv2_3611_1_117
Type: CAZyme
Location: 129472 - 130875 (-)
Type: CAZyme
Location: 129472 - 130875 (-)
Gene ID: HRGMv2_3611_1_118
Type: TC
Location: 130875 - 132587 (-)
Type: TC
Location: 130875 - 132587 (-)
Gene ID: HRGMv2_3611_1_119
Type: TC
Location: 132601 - 132927 (-)
Type: TC
Location: 132601 - 132927 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus degeneri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.