dbCAN Logo

Cluster: HRGMv2_3611_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3611_15 HRGMv2_3611_15_20 20722 21135 - 2.A.7.2.1
pfam HRGMv2_3611_15 HRGMv2_3611_15_21 21181 21402 - PC4
CAZyme HRGMv2_3611_15 HRGMv2_3611_15_22 21438 22478 - GH25
pfam HRGMv2_3611_15 HRGMv2_3611_15_23 22475 22960 - PMSR
pfam HRGMv2_3611_15 HRGMv2_3611_15_24 22957 23433 - ThrE | ThrE_2
TC HRGMv2_3611_15 HRGMv2_3611_15_25 23435 24217 - 2.A.79.1.4
pfam HRGMv2_3611_15 HRGMv2_3611_15_26 24226 25026 - DnaJ
TC HRGMv2_3611_15 HRGMv2_3611_15_27 25107 26882 - 3.A.1.106.2
Gene ID: HRGMv2_3611_15_20
Type: TC
Location: 20722 - 21135 (-)
Gene ID: HRGMv2_3611_15_21
Type: pfam
Location: 21181 - 21402 (-)
Gene ID: HRGMv2_3611_15_22
Type: CAZyme
Location: 21438 - 22478 (-)
Gene ID: HRGMv2_3611_15_23
Type: pfam
Location: 22475 - 22960 (-)
Gene ID: HRGMv2_3611_15_24
Type: pfam
Location: 22957 - 23433 (-)
Gene ID: HRGMv2_3611_15_25
Type: TC
Location: 23435 - 24217 (-)
Gene ID: HRGMv2_3611_15_26
Type: pfam
Location: 24226 - 25026 (-)
Gene ID: HRGMv2_3611_15_27
Type: TC
Location: 25107 - 26882 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List