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Cluster: HRGMv2_3611_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3611_10 HRGMv2_3611_10_45 43466 44476 - 1.A.33.1.5
pfam HRGMv2_3611_10 HRGMv2_3611_10_46 44486 45166 - RadC | UPF0758_N
TC HRGMv2_3611_10 HRGMv2_3611_10_47 45167 45685 - 2.A.87.3.1
pfam HRGMv2_3611_10 HRGMv2_3611_10_48 45685 46074 - NusG_II
TC HRGMv2_3611_10 HRGMv2_3611_10_49 46176 46976 - 3.D.6.1.1
TC HRGMv2_3611_10 HRGMv2_3611_10_50 46986 47561 - 3.D.6.1.2
TC HRGMv2_3611_10 HRGMv2_3611_10_51 47570 48199 - 3.D.6.1.2
pfam HRGMv2_3611_10 HRGMv2_3611_10_52 48208 48750 - FMN_bind
TC HRGMv2_3611_10 HRGMv2_3611_10_53 48743 49723 - 3.D.6.1.2
TC HRGMv2_3611_10 HRGMv2_3611_10_54 49732 51060 - 3.D.6.1.2
CAZyme HRGMv2_3611_10 HRGMv2_3611_10_55 51134 51790 - GH23
pfam HRGMv2_3611_10 HRGMv2_3611_10_56 51777 52379 - CoaE
sulfatase HRGMv2_3611_10 HRGMv2_3611_10_57 52366 54999 - S1_2
TC HRGMv2_3611_10 HRGMv2_3611_10_58 55456 56100 - 3.A.1.124.3
Gene ID: HRGMv2_3611_10_45
Type: TC
Location: 43466 - 44476 (-)
Gene ID: HRGMv2_3611_10_46
Type: pfam
Location: 44486 - 45166 (-)
Gene ID: HRGMv2_3611_10_47
Type: TC
Location: 45167 - 45685 (-)
Gene ID: HRGMv2_3611_10_48
Type: pfam
Location: 45685 - 46074 (-)
Gene ID: HRGMv2_3611_10_49
Type: TC
Location: 46176 - 46976 (-)
Gene ID: HRGMv2_3611_10_50
Type: TC
Location: 46986 - 47561 (-)
Gene ID: HRGMv2_3611_10_51
Type: TC
Location: 47570 - 48199 (-)
Gene ID: HRGMv2_3611_10_52
Type: pfam
Location: 48208 - 48750 (-)
Gene ID: HRGMv2_3611_10_53
Type: TC
Location: 48743 - 49723 (-)
Gene ID: HRGMv2_3611_10_54
Type: TC
Location: 49732 - 51060 (-)
Gene ID: HRGMv2_3611_10_55
Type: CAZyme
Location: 51134 - 51790 (-)
Gene ID: HRGMv2_3611_10_56
Type: pfam
Location: 51777 - 52379 (-)
Gene ID: HRGMv2_3611_10_57
Type: sulfatase
Location: 52366 - 54999 (-)
Gene ID: HRGMv2_3611_10_58
Type: TC
Location: 55456 - 56100 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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