dbCAN Logo

Cluster: HRGMv2_3605_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3605_4 HRGMv2_3605_4_71 78388 80079 + 2.A.58.2.2
TC HRGMv2_3605_4 HRGMv2_3605_4_72 80173 80898 + 3.A.1.147.6
NULL(UNKNOWN) HRGMv2_3605_4 HRGMv2_3605_4_73 80888 82519 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_3605_4 HRGMv2_3605_4_74 82761 84158 + SBP_bac_1
TC HRGMv2_3605_4 HRGMv2_3605_4_75 84223 85113 + 3.A.1.1.18
TC HRGMv2_3605_4 HRGMv2_3605_4_76 85123 85977 + 3.A.1.1.18
CAZyme HRGMv2_3605_4 HRGMv2_3605_4_77 85974 88133 + GH112
pfam HRGMv2_3605_4 HRGMv2_3605_4_78 88136 88315 + DUF6903
TC HRGMv2_3605_4 HRGMv2_3605_4_79 88327 89427 + 3.A.1.1.26
Gene ID: HRGMv2_3605_4_71
Type: TC
Location: 78388 - 80079 (+)
Gene ID: HRGMv2_3605_4_72
Type: TC
Location: 80173 - 80898 (+)
Gene ID: HRGMv2_3605_4_73
Type:
Location: 80888 - 82519 (+)
Gene ID: HRGMv2_3605_4_74
Type: STP
Location: 82761 - 84158 (+)
Gene ID: HRGMv2_3605_4_75
Type: TC
Location: 84223 - 85113 (+)
Gene ID: HRGMv2_3605_4_76
Type: TC
Location: 85123 - 85977 (+)
Gene ID: HRGMv2_3605_4_77
Type: CAZyme
Location: 85974 - 88133 (+)
Gene ID: HRGMv2_3605_4_78
Type: pfam
Location: 88136 - 88315 (+)
Gene ID: HRGMv2_3605_4_79
Type: TC
Location: 88327 - 89427 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List