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Cluster: HRGMv2_3605_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3605_2 HRGMv2_3605_2_102 114502 116529 + 9.B.18.2.1
pfam HRGMv2_3605_2 HRGMv2_3605_2_103 116529 117746 + Aminotran_1_2 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP
pfam HRGMv2_3605_2 HRGMv2_3605_2_104 117778 118788 + 3Beta_HSD | Epimerase | NAD_binding_4 | GDP_Man_Dehyd
TC HRGMv2_3605_2 HRGMv2_3605_2_105 118778 119422 + 9.B.18.1.2
pfam HRGMv2_3605_2 HRGMv2_3605_2_106 119452 120651 + ATP-grasp_3 | CPSase_L_D2 | ATP-grasp_4 | LAL_C2
CAZyme HRGMv2_3605_2 HRGMv2_3605_2_107 120689 121798 + GT4
CAZyme HRGMv2_3605_2 HRGMv2_3605_2_108 121812 122912 + GT4
pfam HRGMv2_3605_2 HRGMv2_3605_2_109 123008 124066 + EpsG
CAZyme HRGMv2_3605_2 HRGMv2_3605_2_110 124090 125169 + GT4
Gene ID: HRGMv2_3605_2_102
Type: TC
Location: 114502 - 116529 (+)
Gene ID: HRGMv2_3605_2_103
Type: pfam
Location: 116529 - 117746 (+)
Gene ID: HRGMv2_3605_2_104
Type: pfam
Location: 117778 - 118788 (+)
Gene ID: HRGMv2_3605_2_105
Type: TC
Location: 118778 - 119422 (+)
Gene ID: HRGMv2_3605_2_106
Type: pfam
Location: 119452 - 120651 (+)
Gene ID: HRGMv2_3605_2_107
Type: CAZyme
Location: 120689 - 121798 (+)
Gene ID: HRGMv2_3605_2_108
Type: CAZyme
Location: 121812 - 122912 (+)
Gene ID: HRGMv2_3605_2_109
Type: pfam
Location: 123008 - 124066 (+)
Gene ID: HRGMv2_3605_2_110
Type: CAZyme
Location: 124090 - 125169 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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