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Cluster: HRGMv2_3605_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3605_2 HRGMv2_3605_2_35 33255 34046 - 3.A.1.15.3
TC HRGMv2_3605_2 HRGMv2_3605_2_36 34039 34722 - 3.A.1.15.11
TC HRGMv2_3605_2 HRGMv2_3605_2_37 34715 35647 - 3.A.1.15.3
CAZyme HRGMv2_3605_2 HRGMv2_3605_2_38 35873 37000 + CE9
pfam HRGMv2_3605_2 HRGMv2_3605_2_39 37106 38113 - GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3
TC HRGMv2_3605_2 HRGMv2_3605_2_40 38123 39484 - 4.A.5.1.3
TC HRGMv2_3605_2 HRGMv2_3605_2_41 39505 39783 - 4.A.5.1.2
TC HRGMv2_3605_2 HRGMv2_3605_2_42 39792 40244 - 4.A.5.1.6
STP HRGMv2_3605_2 HRGMv2_3605_2_43 40261 41361 - SIS | SIS
TF HRGMv2_3605_2 HRGMv2_3605_2_44 41589 43493 + HTH_11 | Mga
TC HRGMv2_3605_2 HRGMv2_3605_2_45 43697 44122 - 4.A.6.1.11
TC HRGMv2_3605_2 HRGMv2_3605_2_46 44122 45117 - 4.A.6.1.4
TC HRGMv2_3605_2 HRGMv2_3605_2_47 45107 45913 - 4.A.6.1.4
TC HRGMv2_3605_2 HRGMv2_3605_2_48 45932 46408 - 4.A.6.1.4
Gene ID: HRGMv2_3605_2_35
Type: TC
Location: 33255 - 34046 (-)
Gene ID: HRGMv2_3605_2_36
Type: TC
Location: 34039 - 34722 (-)
Gene ID: HRGMv2_3605_2_37
Type: TC
Location: 34715 - 35647 (-)
Gene ID: HRGMv2_3605_2_38
Type: CAZyme
Location: 35873 - 37000 (+)
Gene ID: HRGMv2_3605_2_39
Type: pfam
Location: 37106 - 38113 (-)
Gene ID: HRGMv2_3605_2_40
Type: TC
Location: 38123 - 39484 (-)
Gene ID: HRGMv2_3605_2_41
Type: TC
Location: 39505 - 39783 (-)
Gene ID: HRGMv2_3605_2_42
Type: TC
Location: 39792 - 40244 (-)
Gene ID: HRGMv2_3605_2_43
Type: STP
Location: 40261 - 41361 (-)
Gene ID: HRGMv2_3605_2_44
Type: TF
Location: 41589 - 43493 (+)
Gene ID: HRGMv2_3605_2_45
Type: TC
Location: 43697 - 44122 (-)
Gene ID: HRGMv2_3605_2_46
Type: TC
Location: 44122 - 45117 (-)
Gene ID: HRGMv2_3605_2_47
Type: TC
Location: 45107 - 45913 (-)
Gene ID: HRGMv2_3605_2_48
Type: TC
Location: 45932 - 46408 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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