Cluster: HRGMv2_3605_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3605
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3605_1 | HRGMv2_3605_1_391 | 400913 | 401998 | - | GT28 |
| pfam | HRGMv2_3605_1 | HRGMv2_3605_1_392 | 401999 | 403309 | - | Mur_ligase_C | Mur_ligase_M |
| TC | HRGMv2_3605_1 | HRGMv2_3605_1_393 | 403306 | 404256 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3605_1_391
Type: CAZyme
Location: 400913 - 401998 (-)
Type: CAZyme
Location: 400913 - 401998 (-)
Gene ID: HRGMv2_3605_1_392
Type: pfam
Location: 401999 - 403309 (-)
Type: pfam
Location: 401999 - 403309 (-)
Gene ID: HRGMv2_3605_1_393
Type: TC
Location: 403306 - 404256 (-)
Type: TC
Location: 403306 - 404256 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus vaginalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.