Cluster: HRGMv2_3605_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3605
- CGC Family ID: CGCFAM_10401
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3605_1 | HRGMv2_3605_1_159 | 148023 | 149870 | - | GH73 |
| STP | HRGMv2_3605_1 | HRGMv2_3605_1_160 | 150039 | 151577 | - | HD |
| TC | HRGMv2_3605_1 | HRGMv2_3605_1_161 | 151662 | 153401 | - | 3.A.1.106.8 |
| TC | HRGMv2_3605_1 | HRGMv2_3605_1_162 | 153394 | 155127 | - | 3.A.1.106.8 |
Gene ID: HRGMv2_3605_1_159
Type: CAZyme
Location: 148023 - 149870 (-)
Type: CAZyme
Location: 148023 - 149870 (-)
Gene ID: HRGMv2_3605_1_160
Type: STP
Location: 150039 - 151577 (-)
Type: STP
Location: 150039 - 151577 (-)
Gene ID: HRGMv2_3605_1_161
Type: TC
Location: 151662 - 153401 (-)
Type: TC
Location: 151662 - 153401 (-)
Gene ID: HRGMv2_3605_1_162
Type: TC
Location: 153394 - 155127 (-)
Type: TC
Location: 153394 - 155127 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus vaginalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.