Cluster: HRGMv2_3605_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3605
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3605_1 | HRGMv2_3605_1_73 | 66487 | 67917 | + | GT5 |
| CAZyme | HRGMv2_3605_1 | HRGMv2_3605_1_74 | 67919 | 70168 | + | GT35 |
| CAZyme | HRGMv2_3605_1 | HRGMv2_3605_1_75 | 70174 | 72060 | + | GH13_14 |
| pfam | HRGMv2_3605_1 | HRGMv2_3605_1_76 | 72050 | 73741 | + | PGM_PMM_IV | PGM_PMM_I | PGM_PMM_II | PGM_PMM_III |
| STP | HRGMv2_3605_1 | HRGMv2_3605_1_77 | 73969 | 74472 | + | FHA |
| TC | HRGMv2_3605_1 | HRGMv2_3605_1_78 | 74465 | 75736 | + | 2.A.103.1.3 |
Gene ID: HRGMv2_3605_1_73
Type: CAZyme
Location: 66487 - 67917 (+)
Type: CAZyme
Location: 66487 - 67917 (+)
Gene ID: HRGMv2_3605_1_74
Type: CAZyme
Location: 67919 - 70168 (+)
Type: CAZyme
Location: 67919 - 70168 (+)
Gene ID: HRGMv2_3605_1_75
Type: CAZyme
Location: 70174 - 72060 (+)
Type: CAZyme
Location: 70174 - 72060 (+)
Gene ID: HRGMv2_3605_1_76
Type: pfam
Location: 72050 - 73741 (+)
Type: pfam
Location: 72050 - 73741 (+)
Gene ID: HRGMv2_3605_1_77
Type: STP
Location: 73969 - 74472 (+)
Type: STP
Location: 73969 - 74472 (+)
Gene ID: HRGMv2_3605_1_78
Type: TC
Location: 74465 - 75736 (+)
Type: TC
Location: 74465 - 75736 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Tissierellales
Family
Peptoniphilaceae
Genus
Anaerococcus
Species
Anaerococcus vaginalis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.