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Cluster: HRGMv2_3605_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3605_8 HRGMv2_3605_8_21 23071 24441 + 3.A.1.1.45
TC HRGMv2_3605_8 HRGMv2_3605_8_22 24583 25428 + 3.A.1.1.45
TC HRGMv2_3605_8 HRGMv2_3605_8_23 25428 26264 + 3.A.1.1.45
TF HRGMv2_3605_8 HRGMv2_3605_8_24 26269 27312 + LacI
CAZyme HRGMv2_3605_8 HRGMv2_3605_8_25 27309 28769 + GH77
TC HRGMv2_3605_8 HRGMv2_3605_8_26 28821 29933 + 3.A.1.1.22
TC HRGMv2_3605_8 HRGMv2_3605_8_27 30194 31555 + 2.A.66.1.28
TC HRGMv2_3605_8 HRGMv2_3605_8_28 31893 32612 + 3.A.1.149.1
Gene ID: HRGMv2_3605_8_21
Type: TC
Location: 23071 - 24441 (+)
Gene ID: HRGMv2_3605_8_22
Type: TC
Location: 24583 - 25428 (+)
Gene ID: HRGMv2_3605_8_23
Type: TC
Location: 25428 - 26264 (+)
Gene ID: HRGMv2_3605_8_24
Type: TF
Location: 26269 - 27312 (+)
Gene ID: HRGMv2_3605_8_25
Type: CAZyme
Location: 27309 - 28769 (+)
Gene ID: HRGMv2_3605_8_26
Type: TC
Location: 28821 - 29933 (+)
Gene ID: HRGMv2_3605_8_27
Type: TC
Location: 30194 - 31555 (+)
Gene ID: HRGMv2_3605_8_28
Type: TC
Location: 31893 - 32612 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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