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Cluster: HRGMv2_3605_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3605_7 HRGMv2_3605_7_46 44317 45330 - 9.B.157.1.1
pfam HRGMv2_3605_7 HRGMv2_3605_7_47 45340 46020 - RadC | UPF0758_N
TC HRGMv2_3605_7 HRGMv2_3605_7_48 46013 46531 - 2.A.87.3.3
pfam HRGMv2_3605_7 HRGMv2_3605_7_49 46528 46917 - NusG_II
TC HRGMv2_3605_7 HRGMv2_3605_7_50 47029 47826 - 3.D.6.1.2
TC HRGMv2_3605_7 HRGMv2_3605_7_51 47839 48414 - 3.D.6.1.2
TC HRGMv2_3605_7 HRGMv2_3605_7_52 48423 49088 - 3.D.6.1.2
pfam HRGMv2_3605_7 HRGMv2_3605_7_53 49100 49639 - FMN_bind
TC HRGMv2_3605_7 HRGMv2_3605_7_54 49632 50570 - 3.D.6.1.2
TC HRGMv2_3605_7 HRGMv2_3605_7_55 50582 51898 - 3.D.6.1.2
CAZyme HRGMv2_3605_7 HRGMv2_3605_7_56 51963 52619 - GH23
Gene ID: HRGMv2_3605_7_46
Type: TC
Location: 44317 - 45330 (-)
Gene ID: HRGMv2_3605_7_47
Type: pfam
Location: 45340 - 46020 (-)
Gene ID: HRGMv2_3605_7_48
Type: TC
Location: 46013 - 46531 (-)
Gene ID: HRGMv2_3605_7_49
Type: pfam
Location: 46528 - 46917 (-)
Gene ID: HRGMv2_3605_7_50
Type: TC
Location: 47029 - 47826 (-)
Gene ID: HRGMv2_3605_7_51
Type: TC
Location: 47839 - 48414 (-)
Gene ID: HRGMv2_3605_7_52
Type: TC
Location: 48423 - 49088 (-)
Gene ID: HRGMv2_3605_7_53
Type: pfam
Location: 49100 - 49639 (-)
Gene ID: HRGMv2_3605_7_54
Type: TC
Location: 49632 - 50570 (-)
Gene ID: HRGMv2_3605_7_55
Type: TC
Location: 50582 - 51898 (-)
Gene ID: HRGMv2_3605_7_56
Type: CAZyme
Location: 51963 - 52619 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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