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Cluster: HRGMv2_3603_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3603_1 HRGMv2_3603_1_841 870214 870807 - 4.F.1.1.8
TC HRGMv2_3603_1 HRGMv2_3603_1_842 870869 871699 - 3.D.1.8.1
pfam HRGMv2_3603_1 HRGMv2_3603_1_843 871809 872882 - DAC | DisA-linker
STP HRGMv2_3603_1 HRGMv2_3603_1_844 872949 874307 - AAA
CAZyme HRGMv2_3603_1 HRGMv2_3603_1_845 874404 876356 - GH15
pfam HRGMv2_3603_1 HRGMv2_3603_1_846 876442 878100 - Lactamase_B | RMMBL | Beta-Casp | Lactamase_B_6
NULL(UNKNOWN) HRGMv2_3603_1 HRGMv2_3603_1_847 878116 879660 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3603_1 HRGMv2_3603_1_848 879750 882134 - 3.A.12.1.1
Gene ID: HRGMv2_3603_1_841
Type: TC
Location: 870214 - 870807 (-)
Gene ID: HRGMv2_3603_1_842
Type: TC
Location: 870869 - 871699 (-)
Gene ID: HRGMv2_3603_1_843
Type: pfam
Location: 871809 - 872882 (-)
Gene ID: HRGMv2_3603_1_844
Type: STP
Location: 872949 - 874307 (-)
Gene ID: HRGMv2_3603_1_845
Type: CAZyme
Location: 874404 - 876356 (-)
Gene ID: HRGMv2_3603_1_846
Type: pfam
Location: 876442 - 878100 (-)
Gene ID: HRGMv2_3603_1_847
Type:
Location: 878116 - 879660 (-)
Gene ID: HRGMv2_3603_1_848
Type: TC
Location: 879750 - 882134 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-273
→
Species
CAG-273 sp905215615

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3603_1_846 vegan > omnivore 2.36146 0.00665

🧭 Explore Read Mapping of CGC

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