Cluster: HRGMv2_3603_CGC5
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3603
- CGC Family ID: CGCFAM_03142
- Continent: NA
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3603_1 | HRGMv2_3603_1_672 | 699751 | 700725 | - | GT2 |
| pfam | HRGMv2_3603_1 | HRGMv2_3603_1_673 | 700758 | 702164 | - | Polysacc_synt |
| pfam | HRGMv2_3603_1 | HRGMv2_3603_1_674 | 702161 | 703201 | - | PS_pyruv_trans |
| CAZyme | HRGMv2_3603_1 | HRGMv2_3603_1_675 | 703213 | 704190 | - | GT2 |
| STP | HRGMv2_3603_1 | HRGMv2_3603_1_676 | 704201 | 706498 | - | Fer4 |
| pfam | HRGMv2_3603_1 | HRGMv2_3603_1_677 | 706651 | 707796 | - | EpsG |
| CAZyme | HRGMv2_3603_1 | HRGMv2_3603_1_678 | 707814 | 708608 | - | GT111 |
| TC | HRGMv2_3603_1 | HRGMv2_3603_1_679 | 708609 | 709298 | - | 9.B.18.1.2 |
| TC | HRGMv2_3603_1 | HRGMv2_3603_1_680 | 709590 | 711065 | - | 2.A.66.2.16 |
| pfam | HRGMv2_3603_1 | HRGMv2_3603_1_681 | 711136 | 712434 | - | UDPG_MGDP_dh | NAD_Gly3P_dh_N | 3HCDH_N | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N |
| CAZyme | HRGMv2_3603_1 | HRGMv2_3603_1_682 | 712556 | 713329 | - | GT111 |
Gene ID: HRGMv2_3603_1_672
Type: CAZyme
Location: 699751 - 700725 (-)
Type: CAZyme
Location: 699751 - 700725 (-)
Gene ID: HRGMv2_3603_1_673
Type: pfam
Location: 700758 - 702164 (-)
Type: pfam
Location: 700758 - 702164 (-)
Gene ID: HRGMv2_3603_1_674
Type: pfam
Location: 702161 - 703201 (-)
Type: pfam
Location: 702161 - 703201 (-)
Gene ID: HRGMv2_3603_1_675
Type: CAZyme
Location: 703213 - 704190 (-)
Type: CAZyme
Location: 703213 - 704190 (-)
Gene ID: HRGMv2_3603_1_676
Type: STP
Location: 704201 - 706498 (-)
Type: STP
Location: 704201 - 706498 (-)
Gene ID: HRGMv2_3603_1_677
Type: pfam
Location: 706651 - 707796 (-)
Type: pfam
Location: 706651 - 707796 (-)
Gene ID: HRGMv2_3603_1_678
Type: CAZyme
Location: 707814 - 708608 (-)
Type: CAZyme
Location: 707814 - 708608 (-)
Gene ID: HRGMv2_3603_1_679
Type: TC
Location: 708609 - 709298 (-)
Type: TC
Location: 708609 - 709298 (-)
Gene ID: HRGMv2_3603_1_680
Type: TC
Location: 709590 - 711065 (-)
Type: TC
Location: 709590 - 711065 (-)
Gene ID: HRGMv2_3603_1_681
Type: pfam
Location: 711136 - 712434 (-)
Type: pfam
Location: 711136 - 712434 (-)
Gene ID: HRGMv2_3603_1_682
Type: CAZyme
Location: 712556 - 713329 (-)
Type: CAZyme
Location: 712556 - 713329 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-273
Species
CAG-273 sp905215615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.