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Cluster: HRGMv2_3603_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3603_1 HRGMv2_3603_1_101 105649 106569 - 8.A.21.2.2
pfam HRGMv2_3603_1 HRGMv2_3603_1_102 106747 107193 - NfeD
pfam HRGMv2_3603_1 HRGMv2_3603_1_103 107447 109612 + ATP-cone | NRDD
CAZyme HRGMv2_3603_1 HRGMv2_3603_1_104 109719 112130 + GT4
pfam HRGMv2_3603_1 HRGMv2_3603_1_105 112240 112728 + Alg14
pfam HRGMv2_3603_1 HRGMv2_3603_1_106 112725 113189 + Glyco_tran_28_C
CAZyme HRGMv2_3603_1 HRGMv2_3603_1_107 113403 114542 - GT4
TF HRGMv2_3603_1 HRGMv2_3603_1_108 114648 114863 - HTH_3
TC HRGMv2_3603_1 HRGMv2_3603_1_109 115219 116358 + 9.B.146.1.2
Gene ID: HRGMv2_3603_1_101
Type: TC
Location: 105649 - 106569 (-)
Gene ID: HRGMv2_3603_1_102
Type: pfam
Location: 106747 - 107193 (-)
Gene ID: HRGMv2_3603_1_103
Type: pfam
Location: 107447 - 109612 (+)
Gene ID: HRGMv2_3603_1_104
Type: CAZyme
Location: 109719 - 112130 (+)
Gene ID: HRGMv2_3603_1_105
Type: pfam
Location: 112240 - 112728 (+)
Gene ID: HRGMv2_3603_1_106
Type: pfam
Location: 112725 - 113189 (+)
Gene ID: HRGMv2_3603_1_107
Type: CAZyme
Location: 113403 - 114542 (-)
Gene ID: HRGMv2_3603_1_108
Type: TF
Location: 114648 - 114863 (-)
Gene ID: HRGMv2_3603_1_109
Type: TC
Location: 115219 - 116358 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
CAG-273
→
Species
CAG-273 sp905215615

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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