Cluster: HRGMv2_3594_CGC5
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3594
- CGC Family ID: CGCFAM_04090
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3594_116 | HRGMv2_3594_116_2 | 648 | 1127 | - | CBM25 |
| pfam | HRGMv2_3594_116 | HRGMv2_3594_116_3 | 1487 | 3508 | + | VanW | G5 | PG_binding_4 |
| pfam | HRGMv2_3594_116 | HRGMv2_3594_116_4 | 3700 | 4572 | - | DHDPS |
| TC | HRGMv2_3594_116 | HRGMv2_3594_116_5 | 4848 | 5798 | - | 1.A.35.3.4 |
Gene ID: HRGMv2_3594_116_2
Type: CAZyme
Location: 648 - 1127 (-)
Type: CAZyme
Location: 648 - 1127 (-)
Gene ID: HRGMv2_3594_116_3
Type: pfam
Location: 1487 - 3508 (+)
Type: pfam
Location: 1487 - 3508 (+)
Gene ID: HRGMv2_3594_116_4
Type: pfam
Location: 3700 - 4572 (-)
Type: pfam
Location: 3700 - 4572 (-)
Gene ID: HRGMv2_3594_116_5
Type: TC
Location: 4848 - 5798 (-)
Type: TC
Location: 4848 - 5798 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp934169775
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.