Cluster: HRGMv2_3590_CGC6
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 7
- Substrate:
- Genome ID: HRGMv2_3590
- CGC Family ID: CGCFAM_00009
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3590_28 | HRGMv2_3590_28_1 | 3 | 1394 | - | 2.A.66.2.16 |
| CAZyme | HRGMv2_3590_28 | HRGMv2_3590_28_2 | 1463 | 2413 | - | GT2 |
| CAZyme | HRGMv2_3590_28 | HRGMv2_3590_28_3 | 2427 | 3470 | - | GT2 |
| pfam | HRGMv2_3590_28 | HRGMv2_3590_28_4 | 3488 | 3844 | - | DUF2304 |
| CAZyme | HRGMv2_3590_28 | HRGMv2_3590_28_5 | 3844 | 4560 | - | GT2 |
| CAZyme | HRGMv2_3590_28 | HRGMv2_3590_28_6 | 4581 | 6470 | - | GT2 | GT2 |
| pfam | HRGMv2_3590_28 | HRGMv2_3590_28_7 | 6569 | 8122 | - | DUF2142 |
| CAZyme | HRGMv2_3590_28 | HRGMv2_3590_28_8 | 8158 | 9132 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_3590_28 | HRGMv2_3590_28_9 | 9191 | 11338 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3590_28 | HRGMv2_3590_28_10 | 11398 | 13359 | - | GT2 | GT2 |
| pfam | HRGMv2_3590_28 | HRGMv2_3590_28_11 | 13391 | 15157 | - | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 |
| CAZyme | HRGMv2_3590_28 | HRGMv2_3590_28_12 | 15226 | 16212 | - | GT2 |
Gene ID: HRGMv2_3590_28_1
Type: TC
Location: 3 - 1394 (-)
Type: TC
Location: 3 - 1394 (-)
Gene ID: HRGMv2_3590_28_2
Type: CAZyme
Location: 1463 - 2413 (-)
Type: CAZyme
Location: 1463 - 2413 (-)
Gene ID: HRGMv2_3590_28_3
Type: CAZyme
Location: 2427 - 3470 (-)
Type: CAZyme
Location: 2427 - 3470 (-)
Gene ID: HRGMv2_3590_28_4
Type: pfam
Location: 3488 - 3844 (-)
Type: pfam
Location: 3488 - 3844 (-)
Gene ID: HRGMv2_3590_28_5
Type: CAZyme
Location: 3844 - 4560 (-)
Type: CAZyme
Location: 3844 - 4560 (-)
Gene ID: HRGMv2_3590_28_6
Type: CAZyme
Location: 4581 - 6470 (-)
Type: CAZyme
Location: 4581 - 6470 (-)
Gene ID: HRGMv2_3590_28_7
Type: pfam
Location: 6569 - 8122 (-)
Type: pfam
Location: 6569 - 8122 (-)
Gene ID: HRGMv2_3590_28_8
Type: CAZyme
Location: 8158 - 9132 (-)
Type: CAZyme
Location: 8158 - 9132 (-)
Gene ID: HRGMv2_3590_28_9
Type:
Location: 9191 - 11338 (-)
Type:
Location: 9191 - 11338 (-)
Gene ID: HRGMv2_3590_28_10
Type: CAZyme
Location: 11398 - 13359 (-)
Type: CAZyme
Location: 11398 - 13359 (-)
Gene ID: HRGMv2_3590_28_11
Type: pfam
Location: 13391 - 15157 (-)
Type: pfam
Location: 13391 - 15157 (-)
Gene ID: HRGMv2_3590_28_12
Type: CAZyme
Location: 15226 - 16212 (-)
Type: CAZyme
Location: 15226 - 16212 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp000435535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.