Cluster: HRGMv2_3590_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_3590
- CGC Family ID: CGCFAM_00002
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3590_25 | HRGMv2_3590_25_16 | 13477 | 14196 | + | 9.B.18.1.2 |
| CAZyme | HRGMv2_3590_25 | HRGMv2_3590_25_17 | 14201 | 15049 | + | GT2 |
| CAZyme | HRGMv2_3590_25 | HRGMv2_3590_25_18 | 15061 | 16251 | + | GT4 |
| pfam | HRGMv2_3590_25 | HRGMv2_3590_25_19 | 16251 | 16910 | + | DUF1919 |
| CAZyme | HRGMv2_3590_25 | HRGMv2_3590_25_20 | 16907 | 17839 | + | GT11 |
| CAZyme | HRGMv2_3590_25 | HRGMv2_3590_25_21 | 17847 | 18677 | + | GT2 |
Gene ID: HRGMv2_3590_25_16
Type: TC
Location: 13477 - 14196 (+)
Type: TC
Location: 13477 - 14196 (+)
Gene ID: HRGMv2_3590_25_17
Type: CAZyme
Location: 14201 - 15049 (+)
Type: CAZyme
Location: 14201 - 15049 (+)
Gene ID: HRGMv2_3590_25_18
Type: CAZyme
Location: 15061 - 16251 (+)
Type: CAZyme
Location: 15061 - 16251 (+)
Gene ID: HRGMv2_3590_25_19
Type: pfam
Location: 16251 - 16910 (+)
Type: pfam
Location: 16251 - 16910 (+)
Gene ID: HRGMv2_3590_25_20
Type: CAZyme
Location: 16907 - 17839 (+)
Type: CAZyme
Location: 16907 - 17839 (+)
Gene ID: HRGMv2_3590_25_21
Type: CAZyme
Location: 17847 - 18677 (+)
Type: CAZyme
Location: 17847 - 18677 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp000435535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.