Cluster: HRGMv2_3590_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3590
- CGC Family ID: CGCFAM_00713
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3590_7 | HRGMv2_3590_7_20 | 18768 | 21374 | - | 3.A.3.4.1 |
| NULL(UNKNOWN) | HRGMv2_3590_7 | HRGMv2_3590_7_21 | 21538 | 21945 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3590_7 | HRGMv2_3590_7_22 | 21998 | 23002 | - | Semialdhyde_dh | Semialdhyde_dhC |
| CAZyme | HRGMv2_3590_7 | HRGMv2_3590_7_23 | 23202 | 24473 | + | GT2 |
Gene ID: HRGMv2_3590_7_20
Type: TC
Location: 18768 - 21374 (-)
Type: TC
Location: 18768 - 21374 (-)
Gene ID: HRGMv2_3590_7_21
Type:
Location: 21538 - 21945 (+)
Type:
Location: 21538 - 21945 (+)
Gene ID: HRGMv2_3590_7_22
Type: pfam
Location: 21998 - 23002 (-)
Type: pfam
Location: 21998 - 23002 (-)
Gene ID: HRGMv2_3590_7_23
Type: CAZyme
Location: 23202 - 24473 (+)
Type: CAZyme
Location: 23202 - 24473 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp000435535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.