Cluster: HRGMv2_3590_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3590
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3590_3 | HRGMv2_3590_3_9 | 7228 | 8343 | - | GT28 |
| TC | HRGMv2_3590_3 | HRGMv2_3590_3_10 | 8582 | 9670 | - | 2.A.103.1.3 |
| TC | HRGMv2_3590_3 | HRGMv2_3590_3_11 | 9771 | 10751 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_3590_3_9
Type: CAZyme
Location: 7228 - 8343 (-)
Type: CAZyme
Location: 7228 - 8343 (-)
Gene ID: HRGMv2_3590_3_10
Type: TC
Location: 8582 - 9670 (-)
Type: TC
Location: 8582 - 9670 (-)
Gene ID: HRGMv2_3590_3_11
Type: TC
Location: 9771 - 10751 (-)
Type: TC
Location: 9771 - 10751 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
CAG-269
Species
CAG-269 sp000435535
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3590_3_9 | vegan > omnivore | 1.31134 | 0.01195 |
| HRGMv2_3590_3_11 | vegan > omnivore | 1.57164 | 0.01195 |