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Cluster: HRGMv2_3585_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3585_3 HRGMv2_3585_3_20 19861 20547 + 9.B.18.1.2
CAZyme HRGMv2_3585_3 HRGMv2_3585_3_21 20549 21406 + GT2
CAZyme HRGMv2_3585_3 HRGMv2_3585_3_22 21390 22349 + GT2
pfam HRGMv2_3585_3 HRGMv2_3585_3_23 22360 23349 + Stealth_CR2 | Stealth_CR1 | Stealth_CR3
pfam HRGMv2_3585_3 HRGMv2_3585_3_24 23361 24542 + Wzy_C
TC HRGMv2_3585_3 HRGMv2_3585_3_25 24529 26043 + 2.A.66.1.40
pfam HRGMv2_3585_3 HRGMv2_3585_3_26 26031 26729 + Wzz
TC HRGMv2_3585_3 HRGMv2_3585_3_27 26729 27577 + 8.A.3.2.1
Gene ID: HRGMv2_3585_3_20
Type: TC
Location: 19861 - 20547 (+)
Gene ID: HRGMv2_3585_3_21
Type: CAZyme
Location: 20549 - 21406 (+)
Gene ID: HRGMv2_3585_3_22
Type: CAZyme
Location: 21390 - 22349 (+)
Gene ID: HRGMv2_3585_3_23
Type: pfam
Location: 22360 - 23349 (+)
Gene ID: HRGMv2_3585_3_24
Type: pfam
Location: 23361 - 24542 (+)
Gene ID: HRGMv2_3585_3_25
Type: TC
Location: 24529 - 26043 (+)
Gene ID: HRGMv2_3585_3_26
Type: pfam
Location: 26031 - 26729 (+)
Gene ID: HRGMv2_3585_3_27
Type: TC
Location: 26729 - 27577 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
Merdicola
→
Species
Merdicola sp905200315

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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