Cluster: HRGMv2_3585_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3585
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3585_10 | HRGMv2_3585_10_12 | 13891 | 14697 | + | CE4 |
| NULL(UNKNOWN) | HRGMv2_3585_10 | HRGMv2_3585_10_13 | 14752 | 15354 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3585_10 | HRGMv2_3585_10_14 | 15308 | 15868 | + | Spore_YtfJ |
| TC | HRGMv2_3585_10 | HRGMv2_3585_10_15 | 15985 | 16668 | + | 3.A.1.140.1 |
| TC | HRGMv2_3585_10 | HRGMv2_3585_10_16 | 16658 | 17563 | + | 3.A.1.140.1 |
Gene ID: HRGMv2_3585_10_12
Type: CAZyme
Location: 13891 - 14697 (+)
Type: CAZyme
Location: 13891 - 14697 (+)
Gene ID: HRGMv2_3585_10_13
Type:
Location: 14752 - 15354 (+)
Type:
Location: 14752 - 15354 (+)
Gene ID: HRGMv2_3585_10_14
Type: pfam
Location: 15308 - 15868 (+)
Type: pfam
Location: 15308 - 15868 (+)
Gene ID: HRGMv2_3585_10_15
Type: TC
Location: 15985 - 16668 (+)
Type: TC
Location: 15985 - 16668 (+)
Gene ID: HRGMv2_3585_10_16
Type: TC
Location: 16658 - 17563 (+)
Type: TC
Location: 16658 - 17563 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
Merdicola
Species
Merdicola sp905200315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3585_10_15 | vegan > omnivore | 1.27802 | 0.01009 |