Cluster: HRGMv2_3585_CGC12
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3585
- CGC Family ID: CGCFAM_10398
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3585_7 | HRGMv2_3585_7_1 | 238 | 651 | - | 2.A.38.4.4 |
| pfam | HRGMv2_3585_7 | HRGMv2_3585_7_2 | 746 | 1957 | - | tRNA-synt_1b |
| pfam | HRGMv2_3585_7 | HRGMv2_3585_7_3 | 2015 | 2869 | - | TruB_N | TruB-C_2 | TruB_C_2 |
| CAZyme | HRGMv2_3585_7 | HRGMv2_3585_7_4 | 2879 | 3763 | - | CE4 |
| pfam | HRGMv2_3585_7 | HRGMv2_3585_7_5 | 3952 | 5265 | - | PGI |
| pfam | HRGMv2_3585_7 | HRGMv2_3585_7_6 | 5281 | 6663 | - | tRNA-synt_1e | DALR_2 | tRNA-synt_1g | CysS_C |
| CAZyme | HRGMv2_3585_7 | HRGMv2_3585_7_7 | 6716 | 9406 | - | GT51 |
Gene ID: HRGMv2_3585_7_1
Type: TC
Location: 238 - 651 (-)
Type: TC
Location: 238 - 651 (-)
Gene ID: HRGMv2_3585_7_2
Type: pfam
Location: 746 - 1957 (-)
Type: pfam
Location: 746 - 1957 (-)
Gene ID: HRGMv2_3585_7_3
Type: pfam
Location: 2015 - 2869 (-)
Type: pfam
Location: 2015 - 2869 (-)
Gene ID: HRGMv2_3585_7_4
Type: CAZyme
Location: 2879 - 3763 (-)
Type: CAZyme
Location: 2879 - 3763 (-)
Gene ID: HRGMv2_3585_7_5
Type: pfam
Location: 3952 - 5265 (-)
Type: pfam
Location: 3952 - 5265 (-)
Gene ID: HRGMv2_3585_7_6
Type: pfam
Location: 5281 - 6663 (-)
Type: pfam
Location: 5281 - 6663 (-)
Gene ID: HRGMv2_3585_7_7
Type: CAZyme
Location: 6716 - 9406 (-)
Type: CAZyme
Location: 6716 - 9406 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
Merdicola
Species
Merdicola sp905200315
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.