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Cluster: HRGMv2_3585_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3585_6 HRGMv2_3585_6_103 101741 102826 + GT4
TC HRGMv2_3585_6 HRGMv2_3585_6_104 102892 103635 + 3.A.1.103.4
TC HRGMv2_3585_6 HRGMv2_3585_6_105 103650 104426 + 3.A.1.103.4
CAZyme HRGMv2_3585_6 HRGMv2_3585_6_106 104447 105385 + GT2
NULL(UNKNOWN) HRGMv2_3585_6 HRGMv2_3585_6_107 105390 105623 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3585_6 HRGMv2_3585_6_108 105626 106657 + GT4
CAZyme HRGMv2_3585_6 HRGMv2_3585_6_109 106650 107582 + GT2
CAZyme HRGMv2_3585_6 HRGMv2_3585_6_110 107746 108852 + GT4
CAZyme HRGMv2_3585_6 HRGMv2_3585_6_111 108868 109749 + GT2
CAZyme HRGMv2_3585_6 HRGMv2_3585_6_112 109826 110920 + GT2
CAZyme HRGMv2_3585_6 HRGMv2_3585_6_113 110935 112740 + GT32
pfam HRGMv2_3585_6 HRGMv2_3585_6_114 112758 114710 + DUF6020
pfam HRGMv2_3585_6 HRGMv2_3585_6_115 114729 115055 + DUF2304
CAZyme HRGMv2_3585_6 HRGMv2_3585_6_116 115067 116002 + GT2
CAZyme HRGMv2_3585_6 HRGMv2_3585_6_117 116005 117045 + GT2
NULL(UNKNOWN) HRGMv2_3585_6 HRGMv2_3585_6_118 117057 119114 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3585_6 HRGMv2_3585_6_119 119124 120041 + GT2
CAZyme HRGMv2_3585_6 HRGMv2_3585_6_120 120059 120817 + GT111
TC HRGMv2_3585_6 HRGMv2_3585_6_121 120827 122272 + 2.A.66.2.16
pfam HRGMv2_3585_6 HRGMv2_3585_6_122 122277 124307 + Gly_radical | PFL-like
pfam HRGMv2_3585_6 HRGMv2_3585_6_123 124329 125093 + Radical_SAM | Fer4_12
CAZyme HRGMv2_3585_6 HRGMv2_3585_6_124 125111 126016 + GT2
Gene ID: HRGMv2_3585_6_103
Type: CAZyme
Location: 101741 - 102826 (+)
Gene ID: HRGMv2_3585_6_104
Type: TC
Location: 102892 - 103635 (+)
Gene ID: HRGMv2_3585_6_105
Type: TC
Location: 103650 - 104426 (+)
Gene ID: HRGMv2_3585_6_106
Type: CAZyme
Location: 104447 - 105385 (+)
Gene ID: HRGMv2_3585_6_107
Type:
Location: 105390 - 105623 (+)
Gene ID: HRGMv2_3585_6_108
Type: CAZyme
Location: 105626 - 106657 (+)
Gene ID: HRGMv2_3585_6_109
Type: CAZyme
Location: 106650 - 107582 (+)
Gene ID: HRGMv2_3585_6_110
Type: CAZyme
Location: 107746 - 108852 (+)
Gene ID: HRGMv2_3585_6_111
Type: CAZyme
Location: 108868 - 109749 (+)
Gene ID: HRGMv2_3585_6_112
Type: CAZyme
Location: 109826 - 110920 (+)
Gene ID: HRGMv2_3585_6_113
Type: CAZyme
Location: 110935 - 112740 (+)
Gene ID: HRGMv2_3585_6_114
Type: pfam
Location: 112758 - 114710 (+)
Gene ID: HRGMv2_3585_6_115
Type: pfam
Location: 114729 - 115055 (+)
Gene ID: HRGMv2_3585_6_116
Type: CAZyme
Location: 115067 - 116002 (+)
Gene ID: HRGMv2_3585_6_117
Type: CAZyme
Location: 116005 - 117045 (+)
Gene ID: HRGMv2_3585_6_118
Type:
Location: 117057 - 119114 (+)
Gene ID: HRGMv2_3585_6_119
Type: CAZyme
Location: 119124 - 120041 (+)
Gene ID: HRGMv2_3585_6_120
Type: CAZyme
Location: 120059 - 120817 (+)
Gene ID: HRGMv2_3585_6_121
Type: TC
Location: 120827 - 122272 (+)
Gene ID: HRGMv2_3585_6_122
Type: pfam
Location: 122277 - 124307 (+)
Gene ID: HRGMv2_3585_6_123
Type: pfam
Location: 124329 - 125093 (+)
Gene ID: HRGMv2_3585_6_124
Type: CAZyme
Location: 125111 - 126016 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
Merdicola
→
Species
Merdicola sp905200315

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_3585_6_104 vegan > omnivore 1.00377 0.01009

🧭 Explore Read Mapping of CGC

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