Cluster: HRGMv2_3584_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3584
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3584_2 | HRGMv2_3584_2_25 | 21687 | 22373 | - | 2.A.5.5.2 |
| pfam | HRGMv2_3584_2 | HRGMv2_3584_2_26 | 22570 | 23811 | - | Glucosaminidase | G5 | SH3_3 |
| CAZyme | HRGMv2_3584_2 | HRGMv2_3584_2_27 | 23950 | 24735 | + | CE4 |
| NULL(UNKNOWN) | HRGMv2_3584_2 | HRGMv2_3584_2_28 | 24804 | 25646 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3584_2 | HRGMv2_3584_2_29 | 25650 | 27374 | + | 4.C.1.1.4 |
Gene ID: HRGMv2_3584_2_25
Type: TC
Location: 21687 - 22373 (-)
Type: TC
Location: 21687 - 22373 (-)
Gene ID: HRGMv2_3584_2_26
Type: pfam
Location: 22570 - 23811 (-)
Type: pfam
Location: 22570 - 23811 (-)
Gene ID: HRGMv2_3584_2_27
Type: CAZyme
Location: 23950 - 24735 (+)
Type: CAZyme
Location: 23950 - 24735 (+)
Gene ID: HRGMv2_3584_2_28
Type:
Location: 24804 - 25646 (+)
Type:
Location: 24804 - 25646 (+)
Gene ID: HRGMv2_3584_2_29
Type: TC
Location: 25650 - 27374 (+)
Type: TC
Location: 25650 - 27374 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
Merdicola
Species
Merdicola sp900555085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.