Cluster: HRGMv2_3584_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3584
- CGC Family ID: CGCFAM_00049
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3584_1 | HRGMv2_3584_1_260 | 255991 | 256872 | - | GT2 |
| CAZyme | HRGMv2_3584_1 | HRGMv2_3584_1_261 | 256862 | 257629 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_3584_1 | HRGMv2_3584_1_262 | 257622 | 258470 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3584_1 | HRGMv2_3584_1_263 | 258481 | 259155 | - | 9.B.18.1.2 |
| STP | HRGMv2_3584_1 | HRGMv2_3584_1_264 | 259155 | 260390 | - | Aminotran_1_2 |
| TC | HRGMv2_3584_1 | HRGMv2_3584_1_265 | 260416 | 262326 | - | 9.B.18.2.1 |
Gene ID: HRGMv2_3584_1_260
Type: CAZyme
Location: 255991 - 256872 (-)
Type: CAZyme
Location: 255991 - 256872 (-)
Gene ID: HRGMv2_3584_1_261
Type: CAZyme
Location: 256862 - 257629 (-)
Type: CAZyme
Location: 256862 - 257629 (-)
Gene ID: HRGMv2_3584_1_262
Type:
Location: 257622 - 258470 (-)
Type:
Location: 257622 - 258470 (-)
Gene ID: HRGMv2_3584_1_263
Type: TC
Location: 258481 - 259155 (-)
Type: TC
Location: 258481 - 259155 (-)
Gene ID: HRGMv2_3584_1_264
Type: STP
Location: 259155 - 260390 (-)
Type: STP
Location: 259155 - 260390 (-)
Gene ID: HRGMv2_3584_1_265
Type: TC
Location: 260416 - 262326 (-)
Type: TC
Location: 260416 - 262326 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
Merdicola
Species
Merdicola sp900555085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.