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Cluster: HRGMv2_3584_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3584_4 HRGMv2_3584_4_23 18691 19740 - 2.A.120.1.7
pfam HRGMv2_3584_4 HRGMv2_3584_4_24 19787 21181 - ABC_transp_aux | IFT52_GIFT
TC HRGMv2_3584_4 HRGMv2_3584_4_25 21195 21875 - 3.A.1.132.1
TC HRGMv2_3584_4 HRGMv2_3584_4_26 21875 22822 - 3.A.1.132.4
TC HRGMv2_3584_4 HRGMv2_3584_4_27 22999 23598 + 2.A.106.1.3
NULL(UNKNOWN) HRGMv2_3584_4 HRGMv2_3584_4_28 23747 24274 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_3584_4 HRGMv2_3584_4_29 24386 27862 + tRNA_anti-codon | PHP | DNA_pol3_alpha | HHH_6 | DNA_pol3_finger
CAZyme HRGMv2_3584_4 HRGMv2_3584_4_30 27877 29010 - GT28
Gene ID: HRGMv2_3584_4_23
Type: TC
Location: 18691 - 19740 (-)
Gene ID: HRGMv2_3584_4_24
Type: pfam
Location: 19787 - 21181 (-)
Gene ID: HRGMv2_3584_4_25
Type: TC
Location: 21195 - 21875 (-)
Gene ID: HRGMv2_3584_4_26
Type: TC
Location: 21875 - 22822 (-)
Gene ID: HRGMv2_3584_4_27
Type: TC
Location: 22999 - 23598 (+)
Gene ID: HRGMv2_3584_4_28
Type:
Location: 23747 - 24274 (+)
Gene ID: HRGMv2_3584_4_29
Type: pfam
Location: 24386 - 27862 (+)
Gene ID: HRGMv2_3584_4_30
Type: CAZyme
Location: 27877 - 29010 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-508
→
Genus
Merdicola
→
Species
Merdicola sp900555085

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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