Cluster: HRGMv2_3584_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3584
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3584_3 | HRGMv2_3584_3_154 | 151773 | 153362 | + | GH57 |
| pfam | HRGMv2_3584_3 | HRGMv2_3584_3_155 | 153740 | 154588 | + | YtxC |
| NULL(UNKNOWN) | HRGMv2_3584_3 | HRGMv2_3584_3_156 | 154645 | 155511 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3584_3 | HRGMv2_3584_3_157 | 155941 | 156534 | - | 4.F.1.1.8 |
| pfam | HRGMv2_3584_3 | HRGMv2_3584_3_158 | 156566 | 159409 | - | UPF0182 |
| TC | HRGMv2_3584_3 | HRGMv2_3584_3_159 | 159426 | 160331 | - | 3.A.5.1.1 |
Gene ID: HRGMv2_3584_3_154
Type: CAZyme
Location: 151773 - 153362 (+)
Type: CAZyme
Location: 151773 - 153362 (+)
Gene ID: HRGMv2_3584_3_155
Type: pfam
Location: 153740 - 154588 (+)
Type: pfam
Location: 153740 - 154588 (+)
Gene ID: HRGMv2_3584_3_156
Type:
Location: 154645 - 155511 (-)
Type:
Location: 154645 - 155511 (-)
Gene ID: HRGMv2_3584_3_157
Type: TC
Location: 155941 - 156534 (-)
Type: TC
Location: 155941 - 156534 (-)
Gene ID: HRGMv2_3584_3_158
Type: pfam
Location: 156566 - 159409 (-)
Type: pfam
Location: 156566 - 159409 (-)
Gene ID: HRGMv2_3584_3_159
Type: TC
Location: 159426 - 160331 (-)
Type: TC
Location: 159426 - 160331 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
Merdicola
Species
Merdicola sp900555085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3584_3_157 | vegan > omnivore | 1.40083 | 0.01867 |