Cluster: HRGMv2_3584_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3584
- CGC Family ID: CGCFAM_10398
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3584_1 | HRGMv2_3584_1_93 | 89634 | 92324 | + | GT51 |
| pfam | HRGMv2_3584_1 | HRGMv2_3584_1_94 | 92418 | 93800 | + | tRNA-synt_1e | DALR_2 | tRNA-synt_1g | CysS_C |
| pfam | HRGMv2_3584_1 | HRGMv2_3584_1_95 | 93817 | 95130 | + | PGI |
| CAZyme | HRGMv2_3584_1 | HRGMv2_3584_1_96 | 95195 | 96079 | + | CE4 |
| pfam | HRGMv2_3584_1 | HRGMv2_3584_1_97 | 96089 | 96943 | + | TruB_N | TruB_C_2 |
| pfam | HRGMv2_3584_1 | HRGMv2_3584_1_98 | 97002 | 98213 | + | tRNA-synt_1b |
| TC | HRGMv2_3584_1 | HRGMv2_3584_1_99 | 98501 | 98914 | + | 2.A.38.4.4 |
Gene ID: HRGMv2_3584_1_93
Type: CAZyme
Location: 89634 - 92324 (+)
Type: CAZyme
Location: 89634 - 92324 (+)
Gene ID: HRGMv2_3584_1_94
Type: pfam
Location: 92418 - 93800 (+)
Type: pfam
Location: 92418 - 93800 (+)
Gene ID: HRGMv2_3584_1_95
Type: pfam
Location: 93817 - 95130 (+)
Type: pfam
Location: 93817 - 95130 (+)
Gene ID: HRGMv2_3584_1_96
Type: CAZyme
Location: 95195 - 96079 (+)
Type: CAZyme
Location: 95195 - 96079 (+)
Gene ID: HRGMv2_3584_1_97
Type: pfam
Location: 96089 - 96943 (+)
Type: pfam
Location: 96089 - 96943 (+)
Gene ID: HRGMv2_3584_1_98
Type: pfam
Location: 97002 - 98213 (+)
Type: pfam
Location: 97002 - 98213 (+)
Gene ID: HRGMv2_3584_1_99
Type: TC
Location: 98501 - 98914 (+)
Type: TC
Location: 98501 - 98914 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
Merdicola
Species
Merdicola sp900555085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.