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Cluster: HRGMv2_3579_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3579_5 HRGMv2_3579_5_44 45659 46591 + GT2
TC HRGMv2_3579_5 HRGMv2_3579_5_45 46906 47697 + 3.A.1.103.4
CAZyme HRGMv2_3579_5 HRGMv2_3579_5_46 47712 48680 + GT2
TC HRGMv2_3579_5 HRGMv2_3579_5_47 48731 50065 + 3.A.1.103.6
NULL(UNKNOWN) HRGMv2_3579_5 HRGMv2_3579_5_48 50147 51994 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3579_5 HRGMv2_3579_5_49 52002 53813 + GT2 | GT2
CAZyme HRGMv2_3579_5 HRGMv2_3579_5_50 53806 55749 + GT2 | GT2
CAZyme HRGMv2_3579_5 HRGMv2_3579_5_51 55780 56526 + GT2
Gene ID: HRGMv2_3579_5_44
Type: CAZyme
Location: 45659 - 46591 (+)
Gene ID: HRGMv2_3579_5_45
Type: TC
Location: 46906 - 47697 (+)
Gene ID: HRGMv2_3579_5_46
Type: CAZyme
Location: 47712 - 48680 (+)
Gene ID: HRGMv2_3579_5_47
Type: TC
Location: 48731 - 50065 (+)
Gene ID: HRGMv2_3579_5_48
Type:
Location: 50147 - 51994 (+)
Gene ID: HRGMv2_3579_5_49
Type: CAZyme
Location: 52002 - 53813 (+)
Gene ID: HRGMv2_3579_5_50
Type: CAZyme
Location: 53806 - 55749 (+)
Gene ID: HRGMv2_3579_5_51
Type: CAZyme
Location: 55780 - 56526 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-465
→
Genus
CAG-465
→
Species
CAG-465 sp000433135

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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