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Cluster: HRGMv2_3577_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3577_7 HRGMv2_3577_7_41 41992 43230 - 3.A.1.12.8
TC HRGMv2_3577_7 HRGMv2_3577_7_42 43169 43549 - 3.A.1.12.3
TC HRGMv2_3577_7 HRGMv2_3577_7_43 43551 44675 - 3.A.1.12.4
pfam HRGMv2_3577_7 HRGMv2_3577_7_44 44935 45411 - GreA_GreB | GreA_GreB_N
NULL(UNKNOWN) HRGMv2_3577_7 HRGMv2_3577_7_45 45514 46383 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3577_7 HRGMv2_3577_7_46 46525 48204 - GH18
pfam HRGMv2_3577_7 HRGMv2_3577_7_47 48367 48798 + NfeD
TC HRGMv2_3577_7 HRGMv2_3577_7_48 48828 49760 + 8.A.21.2.2
Gene ID: HRGMv2_3577_7_41
Type: TC
Location: 41992 - 43230 (-)
Gene ID: HRGMv2_3577_7_42
Type: TC
Location: 43169 - 43549 (-)
Gene ID: HRGMv2_3577_7_43
Type: TC
Location: 43551 - 44675 (-)
Gene ID: HRGMv2_3577_7_44
Type: pfam
Location: 44935 - 45411 (-)
Gene ID: HRGMv2_3577_7_45
Type:
Location: 45514 - 46383 (-)
Gene ID: HRGMv2_3577_7_46
Type: CAZyme
Location: 46525 - 48204 (-)
Gene ID: HRGMv2_3577_7_47
Type: pfam
Location: 48367 - 48798 (+)
Gene ID: HRGMv2_3577_7_48
Type: TC
Location: 48828 - 49760 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
UBA1234
→
Genus
HGM13618
→
Species
HGM13618 sp900753975

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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