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Cluster: HRGMv2_3577_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3577_1 HRGMv2_3577_1_35 28534 29181 + 9.B.18.1.2
CAZyme HRGMv2_3577_1 HRGMv2_3577_1_36 29261 30385 + GT4
CAZyme HRGMv2_3577_1 HRGMv2_3577_1_37 30401 31462 + GT2
CAZyme HRGMv2_3577_1 HRGMv2_3577_1_38 31466 32530 + GT4
pfam HRGMv2_3577_1 HRGMv2_3577_1_39 32547 33545 + Stealth_CR2 | Stealth_CR1 | Stealth_CR3
CAZyme HRGMv2_3577_1 HRGMv2_3577_1_40 33568 34632 + GT4
CAZyme HRGMv2_3577_1 HRGMv2_3577_1_41 34652 35863 + GT4
CAZyme HRGMv2_3577_1 HRGMv2_3577_1_42 35877 36872 + GT2
CAZyme HRGMv2_3577_1 HRGMv2_3577_1_43 36869 37603 + GT32
STP HRGMv2_3577_1 HRGMv2_3577_1_44 37603 39855 + Fer4
TC HRGMv2_3577_1 HRGMv2_3577_1_45 39852 41396 + 2.A.66.1.40
Gene ID: HRGMv2_3577_1_35
Type: TC
Location: 28534 - 29181 (+)
Gene ID: HRGMv2_3577_1_36
Type: CAZyme
Location: 29261 - 30385 (+)
Gene ID: HRGMv2_3577_1_37
Type: CAZyme
Location: 30401 - 31462 (+)
Gene ID: HRGMv2_3577_1_38
Type: CAZyme
Location: 31466 - 32530 (+)
Gene ID: HRGMv2_3577_1_39
Type: pfam
Location: 32547 - 33545 (+)
Gene ID: HRGMv2_3577_1_40
Type: CAZyme
Location: 33568 - 34632 (+)
Gene ID: HRGMv2_3577_1_41
Type: CAZyme
Location: 34652 - 35863 (+)
Gene ID: HRGMv2_3577_1_42
Type: CAZyme
Location: 35877 - 36872 (+)
Gene ID: HRGMv2_3577_1_43
Type: CAZyme
Location: 36869 - 37603 (+)
Gene ID: HRGMv2_3577_1_44
Type: STP
Location: 37603 - 39855 (+)
Gene ID: HRGMv2_3577_1_45
Type: TC
Location: 39852 - 41396 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
UBA1234
→
Genus
HGM13618
→
Species
HGM13618 sp900753975

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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