Cluster: HRGMv2_3576_CGC5
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_3576
- CGC Family ID: CGCFAM_02199
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3576_3 | HRGMv2_3576_3_58 | 68767 | 69366 | + | 4.F.1.1.8 |
| CAZyme | HRGMv2_3576_3 | HRGMv2_3576_3_59 | 69369 | 70373 | + | GT2 |
| pfam | HRGMv2_3576_3 | HRGMv2_3576_3_60 | 70441 | 71232 | + | ABC2_membrane |
| TC | HRGMv2_3576_3 | HRGMv2_3576_3_61 | 71248 | 72549 | + | 3.A.1.103.1 |
| pfam | HRGMv2_3576_3 | HRGMv2_3576_3_62 | 72566 | 73462 | + | Lactamase_B |
| CAZyme | HRGMv2_3576_3 | HRGMv2_3576_3_63 | 73479 | 74456 | + | GT2 |
| NULL(UNKNOWN) | HRGMv2_3576_3 | HRGMv2_3576_3_64 | 74460 | 76136 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3576_3 | HRGMv2_3576_3_65 | 76190 | 78022 | + | GT2 | GT2 |
| pfam | HRGMv2_3576_3 | HRGMv2_3576_3_66 | 78043 | 79764 | + | DUF2142 |
| CAZyme | HRGMv2_3576_3 | HRGMv2_3576_3_67 | 79792 | 80508 | + | GT2 |
| pfam | HRGMv2_3576_3 | HRGMv2_3576_3_68 | 80510 | 80866 | + | DUF2304 |
| TC | HRGMv2_3576_3 | HRGMv2_3576_3_69 | 80898 | 82427 | + | 2.A.66.1.40 |
| CAZyme | HRGMv2_3576_3 | HRGMv2_3576_3_70 | 82437 | 83378 | + | GT2 |
Gene ID: HRGMv2_3576_3_58
Type: TC
Location: 68767 - 69366 (+)
Type: TC
Location: 68767 - 69366 (+)
Gene ID: HRGMv2_3576_3_59
Type: CAZyme
Location: 69369 - 70373 (+)
Type: CAZyme
Location: 69369 - 70373 (+)
Gene ID: HRGMv2_3576_3_60
Type: pfam
Location: 70441 - 71232 (+)
Type: pfam
Location: 70441 - 71232 (+)
Gene ID: HRGMv2_3576_3_61
Type: TC
Location: 71248 - 72549 (+)
Type: TC
Location: 71248 - 72549 (+)
Gene ID: HRGMv2_3576_3_62
Type: pfam
Location: 72566 - 73462 (+)
Type: pfam
Location: 72566 - 73462 (+)
Gene ID: HRGMv2_3576_3_63
Type: CAZyme
Location: 73479 - 74456 (+)
Type: CAZyme
Location: 73479 - 74456 (+)
Gene ID: HRGMv2_3576_3_64
Type:
Location: 74460 - 76136 (+)
Type:
Location: 74460 - 76136 (+)
Gene ID: HRGMv2_3576_3_65
Type: CAZyme
Location: 76190 - 78022 (+)
Type: CAZyme
Location: 76190 - 78022 (+)
Gene ID: HRGMv2_3576_3_66
Type: pfam
Location: 78043 - 79764 (+)
Type: pfam
Location: 78043 - 79764 (+)
Gene ID: HRGMv2_3576_3_67
Type: CAZyme
Location: 79792 - 80508 (+)
Type: CAZyme
Location: 79792 - 80508 (+)
Gene ID: HRGMv2_3576_3_68
Type: pfam
Location: 80510 - 80866 (+)
Type: pfam
Location: 80510 - 80866 (+)
Gene ID: HRGMv2_3576_3_69
Type: TC
Location: 80898 - 82427 (+)
Type: TC
Location: 80898 - 82427 (+)
Gene ID: HRGMv2_3576_3_70
Type: CAZyme
Location: 82437 - 83378 (+)
Type: CAZyme
Location: 82437 - 83378 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
UMGS1663
Species
UMGS1663 sp934133165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.