Cluster: HRGMv2_3576_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3576
- CGC Family ID: CGCFAM_01066
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3576_3 | HRGMv2_3576_3_24 | 26927 | 29533 | + | GT51 |
| pfam | HRGMv2_3576_3 | HRGMv2_3576_3_25 | 29551 | 30948 | + | tRNA-synt_1e | tRNA-synt_1g | CysS_C |
| pfam | HRGMv2_3576_3 | HRGMv2_3576_3_26 | 31103 | 32152 | + | DUF1189 |
| TC | HRGMv2_3576_3 | HRGMv2_3576_3_27 | 32170 | 33972 | + | 3.A.16.1.1 |
Gene ID: HRGMv2_3576_3_24
Type: CAZyme
Location: 26927 - 29533 (+)
Type: CAZyme
Location: 26927 - 29533 (+)
Gene ID: HRGMv2_3576_3_25
Type: pfam
Location: 29551 - 30948 (+)
Type: pfam
Location: 29551 - 30948 (+)
Gene ID: HRGMv2_3576_3_26
Type: pfam
Location: 31103 - 32152 (+)
Type: pfam
Location: 31103 - 32152 (+)
Gene ID: HRGMv2_3576_3_27
Type: TC
Location: 32170 - 33972 (+)
Type: TC
Location: 32170 - 33972 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
UMGS1663
Species
UMGS1663 sp934133165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3576_3_25 | vegan > omnivore | 1.15850 | 0.01924 |