Cluster: HRGMv2_3576_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3576
- CGC Family ID: CGCFAM_00091
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3576_2 | HRGMv2_3576_2_17 | 17226 | 18233 | - | GT2 |
| CAZyme | HRGMv2_3576_2 | HRGMv2_3576_2_18 | 18240 | 19205 | - | GT2 |
| NULL(UNKNOWN) | HRGMv2_3576_2 | HRGMv2_3576_2_19 | 19198 | 20289 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3576_2 | HRGMv2_3576_2_20 | 20501 | 21379 | - | Glycos_transf_1 | Glyco_transf_4 | Glyco_trans_4_2 | Glyco_trans_1_4 |
| CAZyme | HRGMv2_3576_2 | HRGMv2_3576_2_21 | 21376 | 22230 | - | GT2 |
| TC | HRGMv2_3576_2 | HRGMv2_3576_2_22 | 22257 | 22970 | - | 9.B.18.1.2 |
Gene ID: HRGMv2_3576_2_17
Type: CAZyme
Location: 17226 - 18233 (-)
Type: CAZyme
Location: 17226 - 18233 (-)
Gene ID: HRGMv2_3576_2_18
Type: CAZyme
Location: 18240 - 19205 (-)
Type: CAZyme
Location: 18240 - 19205 (-)
Gene ID: HRGMv2_3576_2_19
Type:
Location: 19198 - 20289 (-)
Type:
Location: 19198 - 20289 (-)
Gene ID: HRGMv2_3576_2_20
Type: pfam
Location: 20501 - 21379 (-)
Type: pfam
Location: 20501 - 21379 (-)
Gene ID: HRGMv2_3576_2_21
Type: CAZyme
Location: 21376 - 22230 (-)
Type: CAZyme
Location: 21376 - 22230 (-)
Gene ID: HRGMv2_3576_2_22
Type: TC
Location: 22257 - 22970 (-)
Type: TC
Location: 22257 - 22970 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
UMGS1663
Species
UMGS1663 sp934133165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.