Cluster: HRGMv2_3576_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3576
- CGC Family ID: CGCFAM_02748
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3576_39 | HRGMv2_3576_39_4 | 1154 | 1846 | - | GT51 |
| pfam | HRGMv2_3576_39 | HRGMv2_3576_39_5 | 1876 | 2223 | - | DUF1093 |
| NULL(UNKNOWN) | HRGMv2_3576_39 | HRGMv2_3576_39_6 | 2235 | 2726 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3576_39 | HRGMv2_3576_39_7 | 2730 | 4649 | - | 3.A.1.134.7 |
Gene ID: HRGMv2_3576_39_4
Type: CAZyme
Location: 1154 - 1846 (-)
Type: CAZyme
Location: 1154 - 1846 (-)
Gene ID: HRGMv2_3576_39_5
Type: pfam
Location: 1876 - 2223 (-)
Type: pfam
Location: 1876 - 2223 (-)
Gene ID: HRGMv2_3576_39_6
Type:
Location: 2235 - 2726 (-)
Type:
Location: 2235 - 2726 (-)
Gene ID: HRGMv2_3576_39_7
Type: TC
Location: 2730 - 4649 (-)
Type: TC
Location: 2730 - 4649 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
UMGS1663
Species
UMGS1663 sp934133165
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3576_39_6 | vegan > omnivore | 3.27506 | 0.01924 |
| HRGMv2_3576_39_7 | vegan > omnivore | 2.63767 | 0.01924 |