Cluster: HRGMv2_3575_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3575
- CGC Family ID: CGCFAM_01997
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3575_17 | HRGMv2_3575_17_16 | 13764 | 15188 | + | GT5 |
| pfam | HRGMv2_3575_17 | HRGMv2_3575_17_17 | 15731 | 16189 | + | PseudoU_synth_2 |
| TC | HRGMv2_3575_17 | HRGMv2_3575_17_18 | 16216 | 17193 | + | 3.A.1.15.3 |
Gene ID: HRGMv2_3575_17_16
Type: CAZyme
Location: 13764 - 15188 (+)
Type: CAZyme
Location: 13764 - 15188 (+)
Gene ID: HRGMv2_3575_17_17
Type: pfam
Location: 15731 - 16189 (+)
Type: pfam
Location: 15731 - 16189 (+)
Gene ID: HRGMv2_3575_17_18
Type: TC
Location: 16216 - 17193 (+)
Type: TC
Location: 16216 - 17193 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
UBA1234
Genus
UBA1234
Species
UBA1234 sp934149305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.