Cluster: HRGMv2_3575_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3575
- CGC Family ID: CGCFAM_03079
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3575_13 | HRGMv2_3575_13_26 | 24227 | 26116 | - | 3.A.1.135.5 |
| TC | HRGMv2_3575_13 | HRGMv2_3575_13_27 | 26106 | 27863 | - | 3.A.1.135.5 |
| TF | HRGMv2_3575_13 | HRGMv2_3575_13_28 | 27869 | 28315 | - | MarR |
| NULL(UNKNOWN) | HRGMv2_3575_13 | HRGMv2_3575_13_29 | 28454 | 29014 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3575_13 | HRGMv2_3575_13_30 | 29064 | 30305 | - | GT2 |
Gene ID: HRGMv2_3575_13_26
Type: TC
Location: 24227 - 26116 (-)
Type: TC
Location: 24227 - 26116 (-)
Gene ID: HRGMv2_3575_13_27
Type: TC
Location: 26106 - 27863 (-)
Type: TC
Location: 26106 - 27863 (-)
Gene ID: HRGMv2_3575_13_28
Type: TF
Location: 27869 - 28315 (-)
Type: TF
Location: 27869 - 28315 (-)
Gene ID: HRGMv2_3575_13_29
Type:
Location: 28454 - 29014 (-)
Type:
Location: 28454 - 29014 (-)
Gene ID: HRGMv2_3575_13_30
Type: CAZyme
Location: 29064 - 30305 (-)
Type: CAZyme
Location: 29064 - 30305 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
UBA1234
Genus
UBA1234
Species
UBA1234 sp934149305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.