Cluster: HRGMv2_3575_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3575
- CGC Family ID: CGCFAM_03260
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3575_12 | HRGMv2_3575_12_19 | 16967 | 17770 | - | 3.A.1.17.13 |
| TC | HRGMv2_3575_12 | HRGMv2_3575_12_20 | 17763 | 18530 | - | 3.A.1.17.8 |
| TF | HRGMv2_3575_12 | HRGMv2_3575_12_21 | 18745 | 19614 | - | KilA-N |
| CAZyme | HRGMv2_3575_12 | HRGMv2_3575_12_22 | 19980 | 20747 | + | CE4 |
Gene ID: HRGMv2_3575_12_19
Type: TC
Location: 16967 - 17770 (-)
Type: TC
Location: 16967 - 17770 (-)
Gene ID: HRGMv2_3575_12_20
Type: TC
Location: 17763 - 18530 (-)
Type: TC
Location: 17763 - 18530 (-)
Gene ID: HRGMv2_3575_12_21
Type: TF
Location: 18745 - 19614 (-)
Type: TF
Location: 18745 - 19614 (-)
Gene ID: HRGMv2_3575_12_22
Type: CAZyme
Location: 19980 - 20747 (+)
Type: CAZyme
Location: 19980 - 20747 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
UBA1234
Genus
UBA1234
Species
UBA1234 sp934149305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.