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Cluster: HRGMv2_3575_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3575_7 HRGMv2_3575_7_31 26006 27673 - GT32
pfam HRGMv2_3575_7 HRGMv2_3575_7_32 27696 28370 - Polysacc_synt | Polysacc_synt_3
CAZyme HRGMv2_3575_7 HRGMv2_3575_7_33 28409 29410 - GT2
CAZyme HRGMv2_3575_7 HRGMv2_3575_7_34 29438 30448 - GT2
CAZyme HRGMv2_3575_7 HRGMv2_3575_7_35 30455 31531 - GT4
CAZyme HRGMv2_3575_7 HRGMv2_3575_7_36 31528 32646 - GT4
pfam HRGMv2_3575_7 HRGMv2_3575_7_37 32648 33265 - Hexapep | PglD_N
TC HRGMv2_3575_7 HRGMv2_3575_7_38 33258 33773 - 9.B.18.1.2
Gene ID: HRGMv2_3575_7_31
Type: CAZyme
Location: 26006 - 27673 (-)
Gene ID: HRGMv2_3575_7_32
Type: pfam
Location: 27696 - 28370 (-)
Gene ID: HRGMv2_3575_7_33
Type: CAZyme
Location: 28409 - 29410 (-)
Gene ID: HRGMv2_3575_7_34
Type: CAZyme
Location: 29438 - 30448 (-)
Gene ID: HRGMv2_3575_7_35
Type: CAZyme
Location: 30455 - 31531 (-)
Gene ID: HRGMv2_3575_7_36
Type: CAZyme
Location: 31528 - 32646 (-)
Gene ID: HRGMv2_3575_7_37
Type: pfam
Location: 32648 - 33265 (-)
Gene ID: HRGMv2_3575_7_38
Type: TC
Location: 33258 - 33773 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
UBA1234
→
Genus
UBA1234
→
Species
UBA1234 sp934149305

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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