Cluster: HRGMv2_3575_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3575
- CGC Family ID: CGCFAM_10397
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3575_4 | HRGMv2_3575_4_89 | 86069 | 87148 | + | GT2 |
| pfam | HRGMv2_3575_4 | HRGMv2_3575_4_90 | 87164 | 88201 | + | Glycos_transf_1 | Glyco_trans_1_4 |
| pfam | HRGMv2_3575_4 | HRGMv2_3575_4_91 | 88284 | 89324 | - | NMT1 | Phosphonate-bd | NMT1_2 |
| TC | HRGMv2_3575_4 | HRGMv2_3575_4_92 | 89390 | 90205 | - | 3.A.1.17.8 |
| TC | HRGMv2_3575_4 | HRGMv2_3575_4_93 | 90198 | 90722 | - | 3.A.1.16.2 |
| TC | HRGMv2_3575_4 | HRGMv2_3575_4_94 | 90760 | 90966 | - | 3.A.1.134.8 |
Gene ID: HRGMv2_3575_4_89
Type: CAZyme
Location: 86069 - 87148 (+)
Type: CAZyme
Location: 86069 - 87148 (+)
Gene ID: HRGMv2_3575_4_90
Type: pfam
Location: 87164 - 88201 (+)
Type: pfam
Location: 87164 - 88201 (+)
Gene ID: HRGMv2_3575_4_91
Type: pfam
Location: 88284 - 89324 (-)
Type: pfam
Location: 88284 - 89324 (-)
Gene ID: HRGMv2_3575_4_92
Type: TC
Location: 89390 - 90205 (-)
Type: TC
Location: 89390 - 90205 (-)
Gene ID: HRGMv2_3575_4_93
Type: TC
Location: 90198 - 90722 (-)
Type: TC
Location: 90198 - 90722 (-)
Gene ID: HRGMv2_3575_4_94
Type: TC
Location: 90760 - 90966 (-)
Type: TC
Location: 90760 - 90966 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
UBA1234
Genus
UBA1234
Species
UBA1234 sp934149305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.