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Cluster: HRGMv2_3573_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3573_1 HRGMv2_3573_1_274 280960 281601 + 9.B.18.1.3
CAZyme HRGMv2_3573_1 HRGMv2_3573_1_275 281618 282373 + GT2
pfam HRGMv2_3573_1 HRGMv2_3573_1_276 282375 283526 + Glyphos_transf
pfam HRGMv2_3573_1 HRGMv2_3573_1_277 283540 283947 + CTP_transf_like
CAZyme HRGMv2_3573_1 HRGMv2_3573_1_278 283979 286198 + GT4 | GT4
CAZyme HRGMv2_3573_1 HRGMv2_3573_1_279 286211 287119 + GT2
pfam HRGMv2_3573_1 HRGMv2_3573_1_280 287092 288273 + Wzy_C
pfam HRGMv2_3573_1 HRGMv2_3573_1_281 288233 288925 + Hexapep | Hexapep | Hexapep_2 | Hexapep_2
TC HRGMv2_3573_1 HRGMv2_3573_1_282 288929 290386 + 2.A.66.2.16
Gene ID: HRGMv2_3573_1_274
Type: TC
Location: 280960 - 281601 (+)
Gene ID: HRGMv2_3573_1_275
Type: CAZyme
Location: 281618 - 282373 (+)
Gene ID: HRGMv2_3573_1_276
Type: pfam
Location: 282375 - 283526 (+)
Gene ID: HRGMv2_3573_1_277
Type: pfam
Location: 283540 - 283947 (+)
Gene ID: HRGMv2_3573_1_278
Type: CAZyme
Location: 283979 - 286198 (+)
Gene ID: HRGMv2_3573_1_279
Type: CAZyme
Location: 286211 - 287119 (+)
Gene ID: HRGMv2_3573_1_280
Type: pfam
Location: 287092 - 288273 (+)
Gene ID: HRGMv2_3573_1_281
Type: pfam
Location: 288233 - 288925 (+)
Gene ID: HRGMv2_3573_1_282
Type: TC
Location: 288929 - 290386 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
CAG-465
→
Genus
CAG-465
→
Species
CAG-465 sp000433335

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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