Cluster: HRGMv2_3573_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3573
- CGC Family ID: CGCFAM_00084
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3573_1 | HRGMv2_3573_1_203 | 211861 | 212814 | + | 9.B.146.1.6 |
| TC | HRGMv2_3573_1 | HRGMv2_3573_1_204 | 212824 | 213960 | + | 2.A.103.1.3 |
| pfam | HRGMv2_3573_1 | HRGMv2_3573_1_205 | 213971 | 214366 | + | dCMP_cyt_deam_1 |
| CAZyme | HRGMv2_3573_1 | HRGMv2_3573_1_206 | 214383 | 215501 | + | GT28 |
Gene ID: HRGMv2_3573_1_203
Type: TC
Location: 211861 - 212814 (+)
Type: TC
Location: 211861 - 212814 (+)
Gene ID: HRGMv2_3573_1_204
Type: TC
Location: 212824 - 213960 (+)
Type: TC
Location: 212824 - 213960 (+)
Gene ID: HRGMv2_3573_1_205
Type: pfam
Location: 213971 - 214366 (+)
Type: pfam
Location: 213971 - 214366 (+)
Gene ID: HRGMv2_3573_1_206
Type: CAZyme
Location: 214383 - 215501 (+)
Type: CAZyme
Location: 214383 - 215501 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-465
Genus
CAG-465
Species
CAG-465 sp000433335
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.