Cluster: HRGMv2_3572_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3572
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3572_5 | HRGMv2_3572_5_28 | 27850 | 30066 | - | 9.B.146.1.1 |
| pfam | HRGMv2_3572_5 | HRGMv2_3572_5_29 | 30070 | 30507 | - | LacAB_rpiB |
| pfam | HRGMv2_3572_5 | HRGMv2_3572_5_30 | 30504 | 30992 | - | LMWPc |
| CAZyme | HRGMv2_3572_5 | HRGMv2_3572_5_31 | 31180 | 31902 | + | GT26 |
| TC | HRGMv2_3572_5 | HRGMv2_3572_5_32 | 32047 | 33024 | - | 9.A.8.1.5 |
| NULL(UNKNOWN) | HRGMv2_3572_5 | HRGMv2_3572_5_33 | 32978 | 33424 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_3572_5 | HRGMv2_3572_5_34 | 33414 | 33890 | - | 9.A.8.1.5 |
Gene ID: HRGMv2_3572_5_28
Type: TC
Location: 27850 - 30066 (-)
Type: TC
Location: 27850 - 30066 (-)
Gene ID: HRGMv2_3572_5_29
Type: pfam
Location: 30070 - 30507 (-)
Type: pfam
Location: 30070 - 30507 (-)
Gene ID: HRGMv2_3572_5_30
Type: pfam
Location: 30504 - 30992 (-)
Type: pfam
Location: 30504 - 30992 (-)
Gene ID: HRGMv2_3572_5_31
Type: CAZyme
Location: 31180 - 31902 (+)
Type: CAZyme
Location: 31180 - 31902 (+)
Gene ID: HRGMv2_3572_5_32
Type: TC
Location: 32047 - 33024 (-)
Type: TC
Location: 32047 - 33024 (-)
Gene ID: HRGMv2_3572_5_33
Type:
Location: 32978 - 33424 (-)
Type:
Location: 32978 - 33424 (-)
Gene ID: HRGMv2_3572_5_34
Type: TC
Location: 33414 - 33890 (-)
Type: TC
Location: 33414 - 33890 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
UBA1234
Genus
UBA1234
Species
UBA1234 sp900765095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.