Cluster: HRGMv2_3572_CGC7
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3572
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3572_5 | HRGMv2_3572_5_13 | 10754 | 12679 | - | 3.A.7.7.1 |
| NULL(UNKNOWN) | HRGMv2_3572_5 | HRGMv2_3572_5_14 | 12772 | 13434 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3572_5 | HRGMv2_3572_5_15 | 13610 | 14680 | - | GT28 |
| TC | HRGMv2_3572_5 | HRGMv2_3572_5_16 | 14751 | 16856 | - | 3.A.7.7.1 |
| STP | HRGMv2_3572_5 | HRGMv2_3572_5_17 | 16875 | 18098 | - | Aminotran_1_2 |
| pfam | HRGMv2_3572_5 | HRGMv2_3572_5_18 | 18206 | 18493 | - | DUF6514 |
| TC | HRGMv2_3572_5 | HRGMv2_3572_5_19 | 18622 | 19419 | - | 3.A.1.15.13 |
| TC | HRGMv2_3572_5 | HRGMv2_3572_5_20 | 19420 | 20139 | - | 3.A.1.15.5 |
| TC | HRGMv2_3572_5 | HRGMv2_3572_5_21 | 20139 | 21077 | - | 3.A.1.15.11 |
| pfam | HRGMv2_3572_5 | HRGMv2_3572_5_22 | 21140 | 21772 | - | Ribul_P_3_epim |
| pfam | HRGMv2_3572_5 | HRGMv2_3572_5_23 | 21766 | 22620 | - | MMR_HSR1 | RsgA_GTPase | RsgA_N |
| TC | HRGMv2_3572_5 | HRGMv2_3572_5_24 | 22638 | 24674 | - | 9.B.106.2.2 |
Gene ID: HRGMv2_3572_5_13
Type: TC
Location: 10754 - 12679 (-)
Type: TC
Location: 10754 - 12679 (-)
Gene ID: HRGMv2_3572_5_14
Type:
Location: 12772 - 13434 (-)
Type:
Location: 12772 - 13434 (-)
Gene ID: HRGMv2_3572_5_15
Type: CAZyme
Location: 13610 - 14680 (-)
Type: CAZyme
Location: 13610 - 14680 (-)
Gene ID: HRGMv2_3572_5_16
Type: TC
Location: 14751 - 16856 (-)
Type: TC
Location: 14751 - 16856 (-)
Gene ID: HRGMv2_3572_5_17
Type: STP
Location: 16875 - 18098 (-)
Type: STP
Location: 16875 - 18098 (-)
Gene ID: HRGMv2_3572_5_18
Type: pfam
Location: 18206 - 18493 (-)
Type: pfam
Location: 18206 - 18493 (-)
Gene ID: HRGMv2_3572_5_19
Type: TC
Location: 18622 - 19419 (-)
Type: TC
Location: 18622 - 19419 (-)
Gene ID: HRGMv2_3572_5_20
Type: TC
Location: 19420 - 20139 (-)
Type: TC
Location: 19420 - 20139 (-)
Gene ID: HRGMv2_3572_5_21
Type: TC
Location: 20139 - 21077 (-)
Type: TC
Location: 20139 - 21077 (-)
Gene ID: HRGMv2_3572_5_22
Type: pfam
Location: 21140 - 21772 (-)
Type: pfam
Location: 21140 - 21772 (-)
Gene ID: HRGMv2_3572_5_23
Type: pfam
Location: 21766 - 22620 (-)
Type: pfam
Location: 21766 - 22620 (-)
Gene ID: HRGMv2_3572_5_24
Type: TC
Location: 22638 - 24674 (-)
Type: TC
Location: 22638 - 24674 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
UBA1234
Genus
UBA1234
Species
UBA1234 sp900765095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.