Cluster: HRGMv2_3572_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3572
- CGC Family ID: CGCFAM_03584
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3572_4 | HRGMv2_3572_4_123 | 134830 | 136014 | - | 3.A.1.122.2 |
| TC | HRGMv2_3572_4 | HRGMv2_3572_4_124 | 136018 | 136698 | - | 3.A.1.122.2 |
| pfam | HRGMv2_3572_4 | HRGMv2_3572_4_125 | 136709 | 138262 | - | HlyD_3 | HlyD_3 | Biotin_lipoyl_2 | Biotin_lipoyl_2 |
| NULL(UNKNOWN) | HRGMv2_3572_4 | HRGMv2_3572_4_126 | 138576 | 139094 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3572_4 | HRGMv2_3572_4_127 | 139191 | 139625 | - | CBM25 |
Gene ID: HRGMv2_3572_4_123
Type: TC
Location: 134830 - 136014 (-)
Type: TC
Location: 134830 - 136014 (-)
Gene ID: HRGMv2_3572_4_124
Type: TC
Location: 136018 - 136698 (-)
Type: TC
Location: 136018 - 136698 (-)
Gene ID: HRGMv2_3572_4_125
Type: pfam
Location: 136709 - 138262 (-)
Type: pfam
Location: 136709 - 138262 (-)
Gene ID: HRGMv2_3572_4_126
Type:
Location: 138576 - 139094 (-)
Type:
Location: 138576 - 139094 (-)
Gene ID: HRGMv2_3572_4_127
Type: CAZyme
Location: 139191 - 139625 (-)
Type: CAZyme
Location: 139191 - 139625 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
UBA1234
Genus
UBA1234
Species
UBA1234 sp900765095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.