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Cluster: HRGMv2_3572_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3572_1 HRGMv2_3572_1_103 103947 105341 - GH18
TC HRGMv2_3572_1 HRGMv2_3572_1_104 105607 106905 - 3.A.1.122.2
NULL(UNKNOWN) HRGMv2_3572_1 HRGMv2_3572_1_105 106923 107213 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3572_1 HRGMv2_3572_1_106 107243 108931 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3572_1 HRGMv2_3572_1_107 108918 109622 - 3.A.1.122.14
TF HRGMv2_3572_1 HRGMv2_3572_1_108 109810 110157 - GntR
NULL(UNKNOWN) HRGMv2_3572_1 HRGMv2_3572_1_109 110169 112193 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3572_1 HRGMv2_3572_1_110 112171 113067 - 3.A.1.105.9
Gene ID: HRGMv2_3572_1_103
Type: CAZyme
Location: 103947 - 105341 (-)
Gene ID: HRGMv2_3572_1_104
Type: TC
Location: 105607 - 106905 (-)
Gene ID: HRGMv2_3572_1_105
Type:
Location: 106923 - 107213 (-)
Gene ID: HRGMv2_3572_1_106
Type:
Location: 107243 - 108931 (-)
Gene ID: HRGMv2_3572_1_107
Type: TC
Location: 108918 - 109622 (-)
Gene ID: HRGMv2_3572_1_108
Type: TF
Location: 109810 - 110157 (-)
Gene ID: HRGMv2_3572_1_109
Type:
Location: 110169 - 112193 (-)
Gene ID: HRGMv2_3572_1_110
Type: TC
Location: 112171 - 113067 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
TANB77
→
Family
UBA1234
→
Genus
UBA1234
→
Species
UBA1234 sp900765095

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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