Cluster: HRGMv2_3570_CGC5
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 9
- Substrate:
- Genome ID: HRGMv2_3570
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3570_3 | HRGMv2_3570_3_106 | 113539 | 117021 | + | GH25 |
| pfam | HRGMv2_3570_3 | HRGMv2_3570_3_107 | 117282 | 118277 | - | Semialdhyde_dh | Semialdhyde_dhC |
| pfam | HRGMv2_3570_3 | HRGMv2_3570_3_108 | 118460 | 119806 | + | O-antigen_lig |
| CAZyme | HRGMv2_3570_3 | HRGMv2_3570_3_109 | 119818 | 120957 | + | GT4 |
| CAZyme | HRGMv2_3570_3 | HRGMv2_3570_3_110 | 120947 | 121924 | + | GT2 |
| CAZyme | HRGMv2_3570_3 | HRGMv2_3570_3_111 | 121928 | 122644 | + | GT32 |
| CAZyme | HRGMv2_3570_3 | HRGMv2_3570_3_112 | 122644 | 123828 | + | GT2 |
| CAZyme | HRGMv2_3570_3 | HRGMv2_3570_3_113 | 123857 | 124573 | + | GT26 |
| pfam | HRGMv2_3570_3 | HRGMv2_3570_3_114 | 124604 | 125707 | + | Amino_oxidase | GLF | NAD_binding_8 |
| CAZyme | HRGMv2_3570_3 | HRGMv2_3570_3_115 | 125725 | 126732 | + | GT113 |
| TC | HRGMv2_3570_3 | HRGMv2_3570_3_116 | 126747 | 128195 | + | 2.A.66.2.16 |
| pfam | HRGMv2_3570_3 | HRGMv2_3570_3_117 | 128305 | 129411 | + | Epimerase_2 |
| CAZyme | HRGMv2_3570_3 | HRGMv2_3570_3_118 | 129472 | 130404 | + | GT2 |
| CAZyme | HRGMv2_3570_3 | HRGMv2_3570_3_119 | 130548 | 131486 | + | GT2 |
| pfam | HRGMv2_3570_3 | HRGMv2_3570_3_120 | 131604 | 132635 | + | Radical_SAM | RlmN_N |
| STP | HRGMv2_3570_3 | HRGMv2_3570_3_121 | 132639 | 133376 | + | SpoIIE |
| TC | HRGMv2_3570_3 | HRGMv2_3570_3_122 | 133418 | 135472 | + | 9.B.106.2.2 |
Gene ID: HRGMv2_3570_3_106
Type: CAZyme
Location: 113539 - 117021 (+)
Type: CAZyme
Location: 113539 - 117021 (+)
Gene ID: HRGMv2_3570_3_107
Type: pfam
Location: 117282 - 118277 (-)
Type: pfam
Location: 117282 - 118277 (-)
Gene ID: HRGMv2_3570_3_108
Type: pfam
Location: 118460 - 119806 (+)
Type: pfam
Location: 118460 - 119806 (+)
Gene ID: HRGMv2_3570_3_109
Type: CAZyme
Location: 119818 - 120957 (+)
Type: CAZyme
Location: 119818 - 120957 (+)
Gene ID: HRGMv2_3570_3_110
Type: CAZyme
Location: 120947 - 121924 (+)
Type: CAZyme
Location: 120947 - 121924 (+)
Gene ID: HRGMv2_3570_3_111
Type: CAZyme
Location: 121928 - 122644 (+)
Type: CAZyme
Location: 121928 - 122644 (+)
Gene ID: HRGMv2_3570_3_112
Type: CAZyme
Location: 122644 - 123828 (+)
Type: CAZyme
Location: 122644 - 123828 (+)
Gene ID: HRGMv2_3570_3_113
Type: CAZyme
Location: 123857 - 124573 (+)
Type: CAZyme
Location: 123857 - 124573 (+)
Gene ID: HRGMv2_3570_3_114
Type: pfam
Location: 124604 - 125707 (+)
Type: pfam
Location: 124604 - 125707 (+)
Gene ID: HRGMv2_3570_3_115
Type: CAZyme
Location: 125725 - 126732 (+)
Type: CAZyme
Location: 125725 - 126732 (+)
Gene ID: HRGMv2_3570_3_116
Type: TC
Location: 126747 - 128195 (+)
Type: TC
Location: 126747 - 128195 (+)
Gene ID: HRGMv2_3570_3_117
Type: pfam
Location: 128305 - 129411 (+)
Type: pfam
Location: 128305 - 129411 (+)
Gene ID: HRGMv2_3570_3_118
Type: CAZyme
Location: 129472 - 130404 (+)
Type: CAZyme
Location: 129472 - 130404 (+)
Gene ID: HRGMv2_3570_3_119
Type: CAZyme
Location: 130548 - 131486 (+)
Type: CAZyme
Location: 130548 - 131486 (+)
Gene ID: HRGMv2_3570_3_120
Type: pfam
Location: 131604 - 132635 (+)
Type: pfam
Location: 131604 - 132635 (+)
Gene ID: HRGMv2_3570_3_121
Type: STP
Location: 132639 - 133376 (+)
Type: STP
Location: 132639 - 133376 (+)
Gene ID: HRGMv2_3570_3_122
Type: TC
Location: 133418 - 135472 (+)
Type: TC
Location: 133418 - 135472 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
UMGS1994
Species
UMGS1994 sp900553945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.