Cluster: HRGMv2_3570_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3570
- CGC Family ID: CGCFAM_10394
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3570_3 | HRGMv2_3570_3_18 | 19071 | 19940 | - | CBM25 |
| TF | HRGMv2_3570_3 | HRGMv2_3570_3_19 | 20166 | 20828 | + | LexA_DNA_bind |
| pfam | HRGMv2_3570_3 | HRGMv2_3570_3_20 | 21022 | 23358 | - | MutS_V | Smr |
| TC | HRGMv2_3570_3 | HRGMv2_3570_3_21 | 23740 | 24729 | + | 1.A.33.1.5 |
Gene ID: HRGMv2_3570_3_18
Type: CAZyme
Location: 19071 - 19940 (-)
Type: CAZyme
Location: 19071 - 19940 (-)
Gene ID: HRGMv2_3570_3_19
Type: TF
Location: 20166 - 20828 (+)
Type: TF
Location: 20166 - 20828 (+)
Gene ID: HRGMv2_3570_3_20
Type: pfam
Location: 21022 - 23358 (-)
Type: pfam
Location: 21022 - 23358 (-)
Gene ID: HRGMv2_3570_3_21
Type: TC
Location: 23740 - 24729 (+)
Type: TC
Location: 23740 - 24729 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
TANB77
Family
CAG-508
Genus
UMGS1994
Species
UMGS1994 sp900553945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.